Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AC245140.2-201ENST00000624054 1939 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AF013593.1-201ENST00000458074 1487 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 MIR1307-201ENST00000408840 149 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AL157792.1-201ENST00000488281 530 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AL022344.2-201ENST00000568976 968 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 SIGLEC18P-201ENST00000602271 909 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 MSNP1-201ENST00000511640 1732 ntBASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.19□□□□□ -0.14
SHROOM3Q8TF72 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC145285.5-201ENST00000562217 361 ntBASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC025262.2-201ENST00000623975 1056 ntBASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 ERP29P1-201ENST00000442902 706 ntBASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 ORAOV1P1-201ENST00000503108 395 ntBASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC104758.3-203ENST00000562938 2123 ntBASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AL049840.2-201ENST00000602722 535 ntBASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 AC092171.5-201ENST00000608012 942 ntBASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHROOM3Q8TF72 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms