Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 MIR645-201ENST00000385283 94 ntBASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AL807761.2-201ENST00000422849 729 ntBASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 ALG1L13P-202ENST00000519320 584 ntBASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AL133499.1-201ENST00000596207 608 ntBASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 AL353726.2-201ENST00000623259 884 ntBASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC39BQ5VTQ0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 AC114271.1-201ENST00000612689 2813 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 EEF1DP6-201ENST00000449232 372 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 FTH1P22-201ENST00000456305 520 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 RNA5SP423-201ENST00000517127 109 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 NDUFB10P1-201ENST00000567319 521 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 SIGLEC18P-201ENST00000602271 909 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 BAP1-211ENST00000615113 489 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 AC009560.1-201ENST00000620208 434 ntBASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
TTC39BQ5VTQ0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms