Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AL121949.1-201ENST00000402043 968 ntBASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AP001120.3-201ENST00000585729 489 ntBASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 PCDHB19P-202ENST00000625133 2914 ntBASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AC072061.1-201ENST00000569710 2234 ntBASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AC091807.1-201ENST00000418838 1544 ntBASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13DQ5THJ4 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AL078621.2-201ENST00000419351 698 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AL589743.3-201ENST00000604121 517 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 KRT8P24-201ENST00000560290 1559 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 MARK2P9-201ENST00000430958 1727 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC022121.1-201ENST00000484584 579 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 AC005089.1-201ENST00000619486 2241 ntBASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13DQ5THJ4 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms