Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.11■□□□□ 0.17
SHROOM1Q2M3G4 AC005089.1-201ENST00000619486 2241 ntBASIC16.11■□□□□ 0.17
SHROOM1Q2M3G4 AC007326.2-201ENST00000624224 7579 ntBASIC16.11■□□□□ 0.17
SHROOM1Q2M3G4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM1Q2M3G4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM1Q2M3G4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AC026748.1-201ENST00000624349 3251 ntBASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AC007279.1-201ENST00000448547 837 ntBASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AC083801.1-201ENST00000491689 358 ntBASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 MIR5001-201ENST00000580185 100 ntBASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 URAHP-205ENST00000610227 398 ntBASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 LINC00638-201ENST00000555578 2518 ntBASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM1Q2M3G4 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC092570.1-201ENST00000414446 469 ntBASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC103563.1-201ENST00000429316 123 ntBASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 RPL29P2-202ENST00000498671 657 ntBASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 TBC1D3P6-201ENST00000505954 962 ntBASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AP003392.6-201ENST00000607709 325 ntBASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC245140.2-201ENST00000624054 1939 ntBASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM1Q2M3G4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 AL928921.2-201ENST00000641325 2442 ntBASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
SHROOM1Q2M3G4 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms