Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AC078875.1-201ENST00000431907 724 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 VDAC1P1-201ENST00000439229 848 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 ATP5G2P4-201ENST00000442175 420 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 RPL13AP20-201ENST00000459725 609 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 HLA-J-204ENST00000495278 958 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 FAM8A2P-201ENST00000528813 1142 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 EID1-202ENST00000560490 584 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AC090164.2-201ENST00000611487 516 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AC004923.1-202ENST00000642106 209 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 FAM90A7P-201ENST00000382628 1395 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 FAM90A23P-201ENST00000400136 1395 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 TNN-202ENST00000621086 4234 ntTSL 5 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AL139158.3-201ENST00000641212 1562 ntBASIC9.32□□□□□ -0.92
SYCNQ0VAF6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC9.32□□□□□ -0.92
SYCNQ0VAF6 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 USP39-220ENST00000613444 2161 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 SHMT1P1-201ENST00000419974 1312 ntBASIC9.31□□□□□ -0.92
SYCNQ0VAF6 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 OR8S1-201ENST00000310194 1080 ntBASIC9.31□□□□□ -0.92
SYCNQ0VAF6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 BNIP3P42-201ENST00000454982 569 ntBASIC9.31□□□□□ -0.92
SYCNQ0VAF6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
SYCNQ0VAF6 AC119751.2-201ENST00000504529 210 ntBASIC9.31□□□□□ -0.92
SYCNQ0VAF6 AC005740.2-201ENST00000511085 419 ntBASIC9.31□□□□□ -0.92
SYCNQ0VAF6 FAM86HP-204ENST00000513466 959 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms