Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CLDN20P56880 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 ELK2AP-201ENST00000392510 1007 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 RPS9P1-201ENST00000419943 583 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CLDN20P56880 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.89□□□□□ -0.35
CLDN20P56880 RN7SL720P-201ENST00000488178 304 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 AC116345.2-201ENST00000512837 523 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 RTN3P1-201ENST00000536295 711 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 AC093752.3-201ENST00000567343 901 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.89□□□□□ -0.35
CLDN20P56880 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.89□□□□□ -0.35
CLDN20P56880 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 MIR6769A-201ENST00000617340 73 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 AC090643.2-201ENST00000623442 2029 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.89□□□□□ -0.35
CLDN20P56880 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLDN20P56880 AP000437.1-201ENST00000624057 2085 ntBASIC12.89□□□□□ -0.35
CLDN20P56880 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN20P56880 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN20P56880 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 AL353637.1-201ENST00000451571 732 ntBASIC12.88□□□□□ -0.35
CLDN20P56880 DUX4L50-201ENST00000455245 715 ntBASIC12.88□□□□□ -0.35
CLDN20P56880 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 AC242376.1-201ENST00000559033 726 ntBASIC12.88□□□□□ -0.35
CLDN20P56880 MIR4754-201ENST00000582477 89 ntBASIC12.88□□□□□ -0.35
CLDN20P56880 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.88□□□□□ -0.35
CLDN20P56880 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 AL353770.1-201ENST00000614915 403 ntBASIC12.88□□□□□ -0.35
CLDN20P56880 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.88□□□□□ -0.35
CLDN20P56880 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLDN20P56880 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.88□□□□□ -0.35
CLDN20P56880 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms