Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
HLA-AP01891 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
HLA-AP01891 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 CTBP2P3-201ENST00000585629 1255 ntBASIC11.88□□□□□ -0.51
HLA-AP01891 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 BRI3BPP1-201ENST00000594224 787 ntBASIC11.88□□□□□ -0.51
HLA-AP01891 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.88□□□□□ -0.51
HLA-AP01891 AC099568.2-201ENST00000609194 695 ntBASIC11.88□□□□□ -0.51
HLA-AP01891 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-AP01891 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 AL391825.1-201ENST00000457671 1364 ntBASIC11.88□□□□□ -0.51
HLA-AP01891 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HLA-AP01891 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-AP01891 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-AP01891 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.88□□□□□ -0.51
HLA-AP01891 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 CLUHP2-201ENST00000426660 1303 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 AL845472.1-202ENST00000624675 4080 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 DDX12P-201ENST00000432996 2947 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 AC020917.4-201ENST00000623994 1999 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-AP01891 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-AP01891 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-AP01891 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
HLA-AP01891 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
HLA-AP01891 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-AP01891 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-AP01891 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.87□□□□□ -0.51
HLA-AP01891 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 ELK1P1-201ENST00000485699 580 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.87□□□□□ -0.51
HLA-AP01891 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.87□□□□□ -0.51
HLA-AP01891 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-AP01891 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-AP01891 AL359711.2-201ENST00000563105 872 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 AC140912.1-201ENST00000577171 1054 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-AP01891 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.87□□□□□ -0.51
HLA-AP01891 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 AP005019.2-201ENST00000615104 511 ntBASIC11.87□□□□□ -0.51
HLA-AP01891 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-AP01891 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-AP01891 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms