Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
O00370 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.93□□□□□ -0.02
O00370 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
O00370 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
O00370 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
O00370 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.92□□□□□ -0.02
O00370 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
O00370 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.92□□□□□ -0.02
O00370 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
O00370 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
O00370 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
O00370 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.92□□□□□ -0.02
O00370 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
O00370 PPP1R2P4-201ENST00000424051 595 ntBASIC14.92□□□□□ -0.02
O00370 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.92□□□□□ -0.02
O00370 RPL8P2-201ENST00000430538 502 ntBASIC14.92□□□□□ -0.02
O00370 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.92□□□□□ -0.02
O00370 AP000358.1-201ENST00000456260 156 ntBASIC14.92□□□□□ -0.02
O00370 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 RN7SL720P-201ENST00000488178 304 ntBASIC14.92□□□□□ -0.02
O00370 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.92□□□□□ -0.02
O00370 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.92□□□□□ -0.02
O00370 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.92□□□□□ -0.02
O00370 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.92□□□□□ -0.02
O00370 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
O00370 AC007718.1-201ENST00000621078 280 ntBASIC14.92□□□□□ -0.02
O00370 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.92□□□□□ -0.02
O00370 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
O00370 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.92□□□□□ -0.02
O00370 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.92□□□□□ -0.02
O00370 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.92□□□□□ -0.02
O00370 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 AC135782.3-201ENST00000562782 2105 ntBASIC14.92□□□□□ -0.02
O00370 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
O00370 FMO6P-201ENST00000236166 1620 ntBASIC14.92□□□□□ -0.02
O00370 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
O00370 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.92□□□□□ -0.02
O00370 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.92□□□□□ -0.02
O00370 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
O00370 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
O00370 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
O00370 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.91□□□□□ -0.02
O00370 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 AC019294.4-201ENST00000561777 2905 ntBASIC14.91□□□□□ -0.02
O00370 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
O00370 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.91□□□□□ -0.02
O00370 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.91□□□□□ -0.02
O00370 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.91□□□□□ -0.02
O00370 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.91□□□□□ -0.02
O00370 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
O00370 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
O00370 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
O00370 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.91□□□□□ -0.02
O00370 CEP164P1-201ENST00000455142 418 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms