Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 FGFR3P1-201ENST00000449999 601 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 SCARNA12-201ENST00000459155 270 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 MRPL22P1-201ENST00000505398 616 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 KRT18P8-201ENST00000581937 1246 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 AC103691.2-201ENST00000618824 433 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 RNA5SP423-201ENST00000517127 109 ntBASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AC138701.2-201ENST00000553634 226 ntBASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AC079328.1-201ENST00000560358 952 ntBASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AC016629.1-201ENST00000596579 586 ntBASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AC138894.2-201ENST00000602838 371 ntBASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AC005632.3-201ENST00000605544 308 ntBASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 AL139424.3-202ENST00000641619 917 ntBASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCDHGC4Q9Y5F7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 SALL4P6-201ENST00000429385 1691 ntBASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 AC026316.1-201ENST00000398900 414 ntBASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 AL512306.1-201ENST00000432698 848 ntBASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 ERP29P1-201ENST00000442902 706 ntBASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.11□□□□□ -0.15
PCDHGC4Q9Y5F7 ORAOV1P1-201ENST00000503108 395 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms