Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 AC245140.2-201ENST00000624054 1939 ntBASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 AL645937.6-201ENST00000641122 3727 ntBASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 BX324167.2-201ENST00000623717 3316 ntBASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AC091181.1-201ENST00000623762 2098 ntBASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AC020763.3-201ENST00000625095 2904 ntBASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AC006001.1-201ENST00000325130 474 ntBASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 FAM58BP-201ENST00000439056 645 ntBASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AC012441.2-201ENST00000444843 739 ntBASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 KRT90P-201ENST00000549264 1064 ntBASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AC139530.3-201ENST00000620344 690 ntBASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
GABARAPL3Q9BY60 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 AF013593.1-201ENST00000458074 1487 ntBASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.71□□□□□ -0.38
GABARAPL3Q9BY60 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GABARAPL3Q9BY60 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GABARAPL3Q9BY60 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms