Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-CQ95604 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-CQ95604 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-CQ95604 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-CQ95604 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-CQ95604 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 RPS6-201ENST00000315377 863 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-CQ95604 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 SERPINB8P1-201ENST00000401898 377 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 CACYBPP3-201ENST00000406011 625 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-CQ95604 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-CQ95604 RPL21P135-201ENST00000442539 791 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 AC022121.1-201ENST00000484584 579 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-CQ95604 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-CQ95604 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-CQ95604 RN7SL162P-201ENST00000579233 292 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC14.23□□□□□ -0.13
HLA-CQ95604 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-CQ95604 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 AC063977.2-201ENST00000601996 421 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 AC022382.1-201ENST00000602768 336 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 AC092535.4-201ENST00000609548 397 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-CQ95604 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 DUX4L33-201ENST00000635217 958 ntBASIC14.23□□□□□ -0.13
HLA-CQ95604 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-CQ95604 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
HLA-CQ95604 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-CQ95604 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 IMPDH1P5-201ENST00000439688 1540 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 AL031577.1-201ENST00000339867 399 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-CQ95604 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-CQ95604 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-CQ95604 TMEM256P1-201ENST00000430550 340 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 AC012066.1-201ENST00000439252 694 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 AC012513.2-201ENST00000441511 1137 ntBASIC14.22□□□□□ -0.13
HLA-CQ95604 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-CQ95604 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-CQ95604 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.22□□□□□ -0.13
HLA-CQ95604 AC098591.1-202ENST00000507914 937 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms