Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 PCDHB17P-202ENST00000623466 3066 ntBASIC12.48□□□□□ -0.41
EFNB1P98172 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
EFNB1P98172 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
EFNB1P98172 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.47□□□□□ -0.41
EFNB1P98172 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.47□□□□□ -0.41
EFNB1P98172 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 EGLN3-205ENST00000547327 2849 ntBASIC12.47□□□□□ -0.41
EFNB1P98172 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB1P98172 KRT43P-201ENST00000434019 910 ntBASIC12.47□□□□□ -0.41
EFNB1P98172 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.47□□□□□ -0.41
EFNB1P98172 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB1P98172 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB1P98172 AC005740.1-201ENST00000515639 522 ntBASIC12.47□□□□□ -0.41
EFNB1P98172 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB1P98172 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB1P98172 AC091271.1-201ENST00000611877 1162 ntBASIC12.47□□□□□ -0.41
EFNB1P98172 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.47□□□□□ -0.41
EFNB1P98172 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.47□□□□□ -0.41
EFNB1P98172 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
EFNB1P98172 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 AC067931.2-201ENST00000623655 2003 ntBASIC12.47□□□□□ -0.41
EFNB1P98172 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
EFNB1P98172 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
EFNB1P98172 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 AC008764.8-201ENST00000623966 2717 ntBASIC12.46□□□□□ -0.41
EFNB1P98172 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
EFNB1P98172 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 LINC02228-202ENST00000641261 2489 ntBASIC12.46□□□□□ -0.41
EFNB1P98172 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
EFNB1P98172 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
EFNB1P98172 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.46□□□□□ -0.41
EFNB1P98172 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.46□□□□□ -0.41
EFNB1P98172 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
EFNB1P98172 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
EFNB1P98172 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.46□□□□□ -0.41
EFNB1P98172 AL596325.1-201ENST00000563991 1082 ntBASIC12.46□□□□□ -0.41
EFNB1P98172 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.46□□□□□ -0.41
EFNB1P98172 AC008805.1-201ENST00000590892 364 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms