Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.05□□□□□ -0.16
AP1S1P61966 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
AP1S1P61966 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
AP1S1P61966 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 AL391647.1-201ENST00000395664 511 ntBASIC14.05□□□□□ -0.16
AP1S1P61966 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.05□□□□□ -0.16
AP1S1P61966 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.05□□□□□ -0.16
AP1S1P61966 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
AP1S1P61966 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.05□□□□□ -0.16
AP1S1P61966 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.05□□□□□ -0.16
AP1S1P61966 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.05□□□□□ -0.16
AP1S1P61966 AC012073.1-201ENST00000606114 1108 ntBASIC14.05□□□□□ -0.16
AP1S1P61966 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.05□□□□□ -0.16
AP1S1P61966 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
AP1S1P61966 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
AP1S1P61966 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
AP1S1P61966 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.05□□□□□ -0.16
AP1S1P61966 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP1S1P61966 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP1S1P61966 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 ABCD1P2-201ENST00000429313 1601 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.04□□□□□ -0.16
AP1S1P61966 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.04□□□□□ -0.16
AP1S1P61966 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
AP1S1P61966 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 NCLP1-201ENST00000445357 1963 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 AC020917.4-201ENST00000623994 1999 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AP1S1P61966 DKKL1P1-201ENST00000400550 698 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 RN7SKP109-201ENST00000410592 316 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.04□□□□□ -0.16
AP1S1P61966 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.04□□□□□ -0.16
AP1S1P61966 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.04□□□□□ -0.16
AP1S1P61966 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.04□□□□□ -0.16
AP1S1P61966 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 NUDT4P2-201ENST00000578341 546 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 AC007250.1-201ENST00000608934 338 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
AP1S1P61966 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.04□□□□□ -0.16
AP1S1P61966 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 AC006480.2-201ENST00000609770 1337 ntBASIC14.04□□□□□ -0.16
AP1S1P61966 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S1P61966 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S1P61966 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms