Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.66□□□□□ -0.22
AP1S2P56377 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 AC107918.4-201ENST00000641966 3141 ntBASIC13.66□□□□□ -0.22
AP1S2P56377 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP1S2P56377 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
AP1S2P56377 KRT18P9-201ENST00000604826 1300 ntBASIC13.65□□□□□ -0.22
AP1S2P56377 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 AL133338.1-201ENST00000565695 1517 ntBASIC13.65□□□□□ -0.22
AP1S2P56377 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
AP1S2P56377 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
AP1S2P56377 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S2P56377 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 ACTG1P2-201ENST00000415776 1125 ntBASIC13.65□□□□□ -0.22
AP1S2P56377 ACTG1P11-201ENST00000425411 1125 ntBASIC13.65□□□□□ -0.22
AP1S2P56377 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.65□□□□□ -0.22
AP1S2P56377 SPTLC1P5-201ENST00000450718 252 ntBASIC13.65□□□□□ -0.22
AP1S2P56377 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S2P56377 RN7SL258P-201ENST00000478664 300 ntBASIC13.65□□□□□ -0.22
AP1S2P56377 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.65□□□□□ -0.22
AP1S2P56377 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.65□□□□□ -0.22
AP1S2P56377 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S2P56377 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
AP1S2P56377 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.65□□□□□ -0.22
AP1S2P56377 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.65□□□□□ -0.22
AP1S2P56377 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S2P56377 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S2P56377 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S2P56377 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AP1S2P56377 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S2P56377 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S2P56377 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.65□□□□□ -0.22
AP1S2P56377 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.65□□□□□ -0.22
AP1S2P56377 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AP1S2P56377 KRT8P31-201ENST00000504812 1408 ntBASIC13.64□□□□□ -0.23
AP1S2P56377 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.64□□□□□ -0.23
AP1S2P56377 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 AL365181.3-201ENST00000605886 3222 ntBASIC13.64□□□□□ -0.23
AP1S2P56377 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
AP1S2P56377 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 AF013593.1-201ENST00000458074 1487 ntBASIC13.64□□□□□ -0.23
AP1S2P56377 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP1S2P56377 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AP1S2P56377 MIR645-201ENST00000385283 94 ntBASIC13.64□□□□□ -0.23
AP1S2P56377 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.64□□□□□ -0.23
AP1S2P56377 AL353637.1-201ENST00000451571 732 ntBASIC13.64□□□□□ -0.23
AP1S2P56377 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.64□□□□□ -0.23
AP1S2P56377 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.64□□□□□ -0.23
AP1S2P56377 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.64□□□□□ -0.23
AP1S2P56377 AL356740.1-201ENST00000602192 1297 ntBASIC13.64□□□□□ -0.23
AP1S2P56377 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms