Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SLC1A1P43005 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SLC1A1P43005 AL445209.1-201ENST00000607269 3491 ntBASIC14.67□□□□□ -0.06
SLC1A1P43005 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A1P43005 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A1P43005 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 KRT8P21-201ENST00000430398 1491 ntBASIC14.66□□□□□ -0.06
SLC1A1P43005 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 OR8T1P-201ENST00000421347 918 ntBASIC14.66□□□□□ -0.06
SLC1A1P43005 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.66□□□□□ -0.06
SLC1A1P43005 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 SLC25A15P3-201ENST00000505530 290 ntBASIC14.66□□□□□ -0.06
SLC1A1P43005 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.66□□□□□ -0.06
SLC1A1P43005 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A1P43005 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A1P43005 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A1P43005 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SLC1A1P43005 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.66□□□□□ -0.06
SLC1A1P43005 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.66□□□□□ -0.06
SLC1A1P43005 Z98257.2-202ENST00000641138 1548 ntBASIC14.66□□□□□ -0.06
SLC1A1P43005 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A1P43005 TUBB1P2-201ENST00000422712 1306 ntBASIC14.66□□□□□ -0.06
SLC1A1P43005 TUBB1P1-201ENST00000503144 1300 ntBASIC14.66□□□□□ -0.06
SLC1A1P43005 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SLC1A1P43005 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A1P43005 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SLC1A1P43005 BEND3P3-201ENST00000611030 2440 ntBASIC14.65□□□□□ -0.06
SLC1A1P43005 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A1P43005 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
SLC1A1P43005 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A1P43005 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SLC1A1P43005 AC083964.2-201ENST00000623988 2396 ntBASIC14.65□□□□□ -0.06
SLC1A1P43005 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A1P43005 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A1P43005 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC1A1P43005 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC1A1P43005 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.65□□□□□ -0.06
SLC1A1P43005 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A1P43005 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC1A1P43005 DUX4L50-201ENST00000455245 715 ntBASIC14.65□□□□□ -0.06
SLC1A1P43005 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A1P43005 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A1P43005 IGHV3-71-201ENST00000523324 359 ntBASIC14.65□□□□□ -0.06
SLC1A1P43005 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC1A1P43005 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC1A1P43005 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A1P43005 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms