Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 TBC1D3J-201ENST00000620719 1426 ntBASIC13.85□□□□□ -0.19
CDH3P22223 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CDH3P22223 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH3P22223 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.85□□□□□ -0.19
CDH3P22223 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH3P22223 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.85□□□□□ -0.19
CDH3P22223 DUX4L50-201ENST00000455245 715 ntBASIC13.85□□□□□ -0.19
CDH3P22223 RN7SL277P-201ENST00000481521 288 ntBASIC13.85□□□□□ -0.19
CDH3P22223 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.85□□□□□ -0.19
CDH3P22223 AC242376.1-201ENST00000559033 726 ntBASIC13.85□□□□□ -0.19
CDH3P22223 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 MIR3907-201ENST00000579424 151 ntBASIC13.85□□□□□ -0.19
CDH3P22223 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 AF254983.2-201ENST00000612331 135 ntBASIC13.85□□□□□ -0.19
CDH3P22223 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 RN7SL832P-201ENST00000607781 1756 ntBASIC13.85□□□□□ -0.19
CDH3P22223 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 AC106818.1-201ENST00000623223 3242 ntBASIC13.85□□□□□ -0.19
CDH3P22223 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CDH3P22223 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH3P22223 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH3P22223 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 AC004241.5-201ENST00000623870 2448 ntBASIC13.84□□□□□ -0.19
CDH3P22223 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH3P22223 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.84□□□□□ -0.19
CDH3P22223 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH3P22223 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 AC092580.1-201ENST00000433998 658 ntBASIC13.84□□□□□ -0.19
CDH3P22223 AC026320.2-201ENST00000434379 478 ntBASIC13.84□□□□□ -0.19
CDH3P22223 AC234782.1-201ENST00000451950 919 ntBASIC13.84□□□□□ -0.19
CDH3P22223 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH3P22223 RN7SL258P-201ENST00000478664 300 ntBASIC13.84□□□□□ -0.19
CDH3P22223 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.84□□□□□ -0.19
CDH3P22223 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH3P22223 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH3P22223 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.84□□□□□ -0.19
CDH3P22223 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 AL022334.2-201ENST00000610000 484 ntBASIC13.84□□□□□ -0.19
CDH3P22223 AC015967.2-201ENST00000624092 234 ntBASIC13.84□□□□□ -0.19
CDH3P22223 AC006435.4-201ENST00000625037 234 ntBASIC13.84□□□□□ -0.19
CDH3P22223 AL356737.1-201ENST00000634391 234 ntBASIC13.84□□□□□ -0.19
CDH3P22223 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDH3P22223 KRT8P19-201ENST00000551916 1455 ntBASIC13.84□□□□□ -0.19
CDH3P22223 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 AC020658.7-201ENST00000624274 2442 ntBASIC13.84□□□□□ -0.19
CDH3P22223 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms