Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PRKCAP17252 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PRKCAP17252 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PRKCAP17252 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.08□□□□□ -0.32
PRKCAP17252 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 USP17L6P-201ENST00000382470 1197 ntBASIC13.08□□□□□ -0.32
PRKCAP17252 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.08□□□□□ -0.32
PRKCAP17252 NKAIN1P1-201ENST00000435754 582 ntBASIC13.08□□□□□ -0.32
PRKCAP17252 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 MARK2P5-201ENST00000507649 634 ntBASIC13.08□□□□□ -0.32
PRKCAP17252 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.08□□□□□ -0.32
PRKCAP17252 MIR4538-201ENST00000581377 78 ntBASIC13.08□□□□□ -0.32
PRKCAP17252 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.08□□□□□ -0.32
PRKCAP17252 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.08□□□□□ -0.32
PRKCAP17252 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.08□□□□□ -0.32
PRKCAP17252 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.08□□□□□ -0.32
PRKCAP17252 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.08□□□□□ -0.32
PRKCAP17252 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PRKCAP17252 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.08□□□□□ -0.32
PRKCAP17252 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.07□□□□□ -0.32
PRKCAP17252 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PRKCAP17252 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PRKCAP17252 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PRKCAP17252 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 AC102953.2-201ENST00000609755 3026 ntBASIC13.07□□□□□ -0.32
PRKCAP17252 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PRKCAP17252 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
PRKCAP17252 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 TMEM198B-204ENST00000484016 896 ntBASIC13.07□□□□□ -0.32
PRKCAP17252 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 AC140658.4-201ENST00000561990 352 ntBASIC13.07□□□□□ -0.32
PRKCAP17252 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
PRKCAP17252 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
PRKCAP17252 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PRKCAP17252 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PRKCAP17252 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PRKCAP17252 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PRKCAP17252 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRKCAP17252 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms