Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 AC020763.3-201ENST00000625095 2904 ntBASIC14.5□□□□□ -0.09
CD48P09326 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.5□□□□□ -0.09
CD48P09326 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CD48P09326 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 BANF1P3-201ENST00000412556 261 ntBASIC14.5□□□□□ -0.09
CD48P09326 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 GPAA1P2-201ENST00000417923 928 ntBASIC14.5□□□□□ -0.09
CD48P09326 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.5□□□□□ -0.09
CD48P09326 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.5□□□□□ -0.09
CD48P09326 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.5□□□□□ -0.09
CD48P09326 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 AL109837.1-201ENST00000603272 613 ntBASIC14.5□□□□□ -0.09
CD48P09326 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.5□□□□□ -0.09
CD48P09326 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.5□□□□□ -0.09
CD48P09326 AC091544.8-201ENST00000619490 361 ntBASIC14.5□□□□□ -0.09
CD48P09326 AC100757.4-201ENST00000626934 759 ntBASIC14.5□□□□□ -0.09
CD48P09326 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CD48P09326 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.5□□□□□ -0.09
CD48P09326 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 ZNF493-208ENST00000599461 1769 ntBASIC14.5□□□□□ -0.09
CD48P09326 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CD48P09326 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CD48P09326 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.49□□□□□ -0.09
CD48P09326 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CD48P09326 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 AC073869.2-201ENST00000417338 1026 ntBASIC14.49□□□□□ -0.09
CD48P09326 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CD48P09326 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CD48P09326 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.49□□□□□ -0.09
CD48P09326 KRT8P13-201ENST00000463294 1010 ntBASIC14.49□□□□□ -0.09
CD48P09326 AC099548.2-209ENST00000480264 625 ntBASIC14.49□□□□□ -0.09
CD48P09326 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.49□□□□□ -0.09
CD48P09326 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.49□□□□□ -0.09
CD48P09326 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.49□□□□□ -0.09
CD48P09326 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CD48P09326 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.49□□□□□ -0.09
CD48P09326 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.49□□□□□ -0.09
CD48P09326 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.49□□□□□ -0.09
CD48P09326 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CD48P09326 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.49□□□□□ -0.09
CD48P09326 MIR6769A-201ENST00000617340 73 ntBASIC14.49□□□□□ -0.09
CD48P09326 AC015967.2-201ENST00000624092 234 ntBASIC14.49□□□□□ -0.09
CD48P09326 AC006435.4-201ENST00000625037 234 ntBASIC14.49□□□□□ -0.09
CD48P09326 AL356737.1-201ENST00000634391 234 ntBASIC14.49□□□□□ -0.09
CD48P09326 AL139424.3-202ENST00000641619 917 ntBASIC14.49□□□□□ -0.09
CD48P09326 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.49□□□□□ -0.09
CD48P09326 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CD48P09326 AC138028.6-201ENST00000616106 1482 ntBASIC14.49□□□□□ -0.09
CD48P09326 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CD48P09326 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms