Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC004884.1-201ENST00000393647 319 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 SSR4P1-201ENST00000415143 412 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 AKR1C5P-201ENST00000427165 609 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC010677.1-201ENST00000441690 412 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 HLA-DRB9-201ENST00000449413 343 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC8.53□□□□□ -1.04
PKHD1P08F94 LDHAL6CP-201ENST00000502352 1142 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC8.53□□□□□ -1.04
PKHD1P08F94 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC8.53□□□□□ -1.04
PKHD1P08F94 MT1G-204ENST00000569500 305 ntTSL 3 BASIC8.53□□□□□ -1.04
PKHD1P08F94 NAA38-204ENST00000575208 529 ntTSL 3 BASIC8.53□□□□□ -1.04
PKHD1P08F94 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC244102.2-201ENST00000597568 955 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC8.53□□□□□ -1.04
PKHD1P08F94 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
PKHD1P08F94 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC8.53□□□□□ -1.04
PKHD1P08F94 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC106881.1-201ENST00000605849 3329 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC8.53□□□□□ -1.04
PKHD1P08F94 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PKHD1P08F94 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC8.53□□□□□ -1.04
PKHD1P08F94 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC005077.3-201ENST00000449614 213 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC8.53□□□□□ -1.04
PKHD1P08F94 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC8.53□□□□□ -1.04
PKHD1P08F94 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 CICP24-201ENST00000605464 2705 ntBASIC8.53□□□□□ -1.04
PKHD1P08F94 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
PKHD1P08F94 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC8.53□□□□□ -1.04
PKHD1P08F94 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PKHD1P08F94 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PKHD1P08F94 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
PKHD1P08F94 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
PKHD1P08F94 AC140479.7-201ENST00000636301 2332 ntBASIC8.52□□□□□ -1.04
PKHD1P08F94 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
PKHD1P08F94 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PKHD1P08F94 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC8.52□□□□□ -1.05
PKHD1P08F94 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 MED20-204ENST00000409312 932 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 DNM1P17-201ENST00000512082 426 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
PKHD1P08F94 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC8.52□□□□□ -1.05
PKHD1P08F94 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC8.52□□□□□ -1.05
PKHD1P08F94 AP006621.5-202ENST00000623692 636 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PKHD1P08F94 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 AC073585.1-201ENST00000368895 1328 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
PKHD1P08F94 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC8.52□□□□□ -1.05
PKHD1P08F94 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 TSEN15P3-201ENST00000422363 367 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 OR2A15P-201ENST00000463814 900 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 HNRNPA1P4-201ENST00000509706 756 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 ALG1L14P-201ENST00000514230 434 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC8.52□□□□□ -1.05
PKHD1P08F94 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
PKHD1P08F94 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 RN7SL341P-201ENST00000613745 298 ntBASIC8.52□□□□□ -1.05
PKHD1P08F94 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC8.52□□□□□ -1.05
PKHD1P08F94 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
PKHD1P08F94 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC8.52□□□□□ -1.05
PKHD1P08F94 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PKHD1P08F94 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms