Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.58□□□□□ -0.4
COPS3Q9UNS2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 RN7SL692P-201ENST00000464677 288 ntBASIC12.58□□□□□ -0.4
COPS3Q9UNS2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AC005962.1-201ENST00000584100 773 ntBASIC12.58□□□□□ -0.4
COPS3Q9UNS2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AL590824.1-201ENST00000403828 1349 ntBASIC12.58□□□□□ -0.4
COPS3Q9UNS2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
COPS3Q9UNS2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AC006122.1-201ENST00000493323 440 ntBASIC12.57□□□□□ -0.4
COPS3Q9UNS2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AL591471.1-201ENST00000621855 229 ntBASIC12.57□□□□□ -0.4
COPS3Q9UNS2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 RHOXF1P1-202ENST00000635473 501 ntBASIC12.57□□□□□ -0.4
COPS3Q9UNS2 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AC144522.1-201ENST00000625111 1658 ntBASIC12.57□□□□□ -0.4
COPS3Q9UNS2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SHMT1P1-201ENST00000419974 1312 ntBASIC12.57□□□□□ -0.4
COPS3Q9UNS2 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 AL031719.1-201ENST00000623365 2587 ntBASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms