Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 AC069218.1-201ENST00000435269 762 ntBASIC14.87□□□□□ -0.03
CD248Q9HCU0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 AC019193.1-201ENST00000506678 823 ntBASIC14.87□□□□□ -0.03
CD248Q9HCU0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 BX324167.2-201ENST00000623717 3316 ntBASIC14.87□□□□□ -0.03
CD248Q9HCU0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 AC090857.1-201ENST00000527400 390 ntBASIC14.86□□□□□ -0.03
CD248Q9HCU0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 KRT8P21-201ENST00000430398 1491 ntBASIC14.86□□□□□ -0.03
CD248Q9HCU0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD248Q9HCU0 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CD248Q9HCU0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AC111170.3-201ENST00000624282 2464 ntBASIC14.85□□□□□ -0.03
CD248Q9HCU0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AC026316.1-201ENST00000398900 414 ntBASIC14.85□□□□□ -0.03
CD248Q9HCU0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.85□□□□□ -0.03
CD248Q9HCU0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms