Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 CR383656.2-201ENST00000548656 2254 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 KRT17P5-201ENST00000332088 839 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 FAM86MP-201ENST00000340703 885 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 SNORA50C-201ENST00000408535 133 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC016700.1-201ENST00000429424 312 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC116345.2-201ENST00000512837 523 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC100757.4-201ENST00000626934 759 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 SNORA50.1-201ENST00000628590 135 ntBASIC13.14□□□□□ -0.31
NUP43Q8NFH3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NUP43Q8NFH3 TUBBP5-203ENST00000508529 1334 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC005252.3-201ENST00000623855 2258 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC020917.4-201ENST00000623994 1999 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SLC25A15P3-201ENST00000505530 290 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 MIR4538-201ENST00000581377 78 ntBASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.13□□□□□ -0.31
NUP43Q8NFH3 AC020914.3-201ENST00000594712 304 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms