Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 CYP46A4P-201ENST00000414953 267 ntBASIC12.26□□□□□ -0.45
HIST1H3AP68431 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 PPP1R2P4-201ENST00000424051 595 ntBASIC12.26□□□□□ -0.45
HIST1H3AP68431 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 BX284668.4-201ENST00000453917 508 ntBASIC12.26□□□□□ -0.45
HIST1H3AP68431 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 ALG1L13P-202ENST00000519320 584 ntBASIC12.26□□□□□ -0.45
HIST1H3AP68431 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 AL021707.6-201ENST00000609212 491 ntBASIC12.26□□□□□ -0.45
HIST1H3AP68431 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H3AP68431 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H3AP68431 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 FAM86MP-201ENST00000340703 885 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 BANF1P3-201ENST00000412556 261 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 AC020914.3-201ENST00000594712 304 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 AL356740.1-201ENST00000602192 1297 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 AC073869.1-201ENST00000415574 2762 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 AC138028.6-201ENST00000616106 1482 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 MSNP1-201ENST00000511640 1732 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 ZNF493-208ENST00000599461 1769 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 AL591122.2-201ENST00000624125 1853 ntBASIC12.25□□□□□ -0.45
HIST1H3AP68431 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H3AP68431 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H3AP68431 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H3AP68431 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H3AP68431 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms