Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.86□□□□□ -0.35
CENPAP49450 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CENPAP49450 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 CICP7-201ENST00000432723 2477 ntBASIC12.85□□□□□ -0.35
CENPAP49450 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CENPAP49450 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.85□□□□□ -0.35
CENPAP49450 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.85□□□□□ -0.35
CENPAP49450 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 FAM58BP-201ENST00000439056 645 ntBASIC12.85□□□□□ -0.35
CENPAP49450 KLF2P4-201ENST00000451959 1225 ntBASIC12.85□□□□□ -0.35
CENPAP49450 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.85□□□□□ -0.35
CENPAP49450 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.85□□□□□ -0.35
CENPAP49450 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.85□□□□□ -0.35
CENPAP49450 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.85□□□□□ -0.35
CENPAP49450 AC023310.1-201ENST00000554836 735 ntBASIC12.85□□□□□ -0.35
CENPAP49450 MIR3197-201ENST00000582241 73 ntBASIC12.85□□□□□ -0.35
CENPAP49450 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.85□□□□□ -0.35
CENPAP49450 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CENPAP49450 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 AC072061.1-201ENST00000569710 2234 ntBASIC12.85□□□□□ -0.35
CENPAP49450 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CENPAP49450 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CENPAP49450 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.85□□□□□ -0.35
CENPAP49450 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CENPAP49450 LAP3P2-201ENST00000454686 1454 ntBASIC12.85□□□□□ -0.35
CENPAP49450 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CENPAP49450 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CENPAP49450 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CENPAP49450 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CENPAP49450 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CENPAP49450 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms