Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.4■□□□□ 0.06
USP8P40818 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.4■□□□□ 0.06
USP8P40818 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 AC022217.1-201ENST00000521069 738 ntBASIC15.4■□□□□ 0.06
USP8P40818 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.4■□□□□ 0.06
USP8P40818 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.4■□□□□ 0.06
USP8P40818 AC140658.4-201ENST00000561990 352 ntBASIC15.4■□□□□ 0.06
USP8P40818 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.4■□□□□ 0.06
USP8P40818 BAP1-211ENST00000615113 489 ntBASIC15.4■□□□□ 0.06
USP8P40818 AL023803.2-201ENST00000620080 638 ntBASIC15.4■□□□□ 0.06
USP8P40818 AC090386.2-201ENST00000623010 1039 ntBASIC15.4■□□□□ 0.06
USP8P40818 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.4■□□□□ 0.06
USP8P40818 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.4■□□□□ 0.06
USP8P40818 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.4■□□□□ 0.06
USP8P40818 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.4■□□□□ 0.06
USP8P40818 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
USP8P40818 AC005014.1-201ENST00000432006 2976 ntBASIC15.4■□□□□ 0.06
USP8P40818 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 AC072061.1-201ENST00000569710 2234 ntBASIC15.4■□□□□ 0.06
USP8P40818 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC15.4■□□□□ 0.06
USP8P40818 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.4■□□□□ 0.06
USP8P40818 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.4■□□□□ 0.06
USP8P40818 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
USP8P40818 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
USP8P40818 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
USP8P40818 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 AC114271.1-201ENST00000612689 2813 ntBASIC15.39■□□□□ 0.05
USP8P40818 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
USP8P40818 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
USP8P40818 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.39■□□□□ 0.05
USP8P40818 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.39■□□□□ 0.05
USP8P40818 AC091271.1-201ENST00000611877 1162 ntBASIC15.39■□□□□ 0.05
USP8P40818 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.39■□□□□ 0.05
USP8P40818 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
USP8P40818 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USP8P40818 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC15.38■□□□□ 0.05
USP8P40818 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
USP8P40818 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.38■□□□□ 0.05
USP8P40818 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
USP8P40818 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.38■□□□□ 0.05
USP8P40818 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.38■□□□□ 0.05
USP8P40818 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
USP8P40818 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
USP8P40818 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.38■□□□□ 0.05
USP8P40818 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.38■□□□□ 0.05
USP8P40818 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
USP8P40818 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
USP8P40818 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
USP8P40818 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
USP8P40818 KRT18P36-201ENST00000411618 1276 ntBASIC15.38■□□□□ 0.05
USP8P40818 VDAC1P1-201ENST00000439229 848 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms