Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CU633904.3-201ENST00000624042 1029 ntBASIC11.53□□□□□ -0.56
CEACAM3P40198 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.53□□□□□ -0.56
CEACAM3P40198 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 POM121L4P-202ENST00000427789 1891 ntBASIC11.53□□□□□ -0.56
CEACAM3P40198 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.53□□□□□ -0.56
CEACAM3P40198 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CEACAM3P40198 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.52□□□□□ -0.56
CEACAM3P40198 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.52□□□□□ -0.56
CEACAM3P40198 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.52□□□□□ -0.56
CEACAM3P40198 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
CEACAM3P40198 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.52□□□□□ -0.56
CEACAM3P40198 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CEACAM3P40198 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
CEACAM3P40198 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CEACAM3P40198 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CEACAM3P40198 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CEACAM3P40198 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.57
CEACAM3P40198 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.52□□□□□ -0.57
CEACAM3P40198 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 BRD7P5-201ENST00000299197 1822 ntBASIC11.52□□□□□ -0.57
CEACAM3P40198 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 RPS9P1-201ENST00000419943 583 ntBASIC11.52□□□□□ -0.57
CEACAM3P40198 PTPA-217ENST00000434095 870 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 MSRA-203ENST00000441698 788 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC11.52□□□□□ -0.57
CEACAM3P40198 RN7SL258P-201ENST00000478664 300 ntBASIC11.52□□□□□ -0.57
CEACAM3P40198 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC11.52□□□□□ -0.57
CEACAM3P40198 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 DGCR9-201ENST00000609630 2415 ntBASIC11.52□□□□□ -0.57
CEACAM3P40198 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CEACAM3P40198 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.52□□□□□ -0.57
CEACAM3P40198 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
CEACAM3P40198 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CEACAM3P40198 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.52□□□□□ -0.57
CEACAM3P40198 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CEACAM3P40198 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.52□□□□□ -0.57
CEACAM3P40198 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.51□□□□□ -0.57
CEACAM3P40198 AC015909.3-201ENST00000572855 1794 ntBASIC11.51□□□□□ -0.57
CEACAM3P40198 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.51□□□□□ -0.57
CEACAM3P40198 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CEACAM3P40198 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CEACAM3P40198 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC11.51□□□□□ -0.57
CEACAM3P40198 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms