Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.87□□□□□ -0.19
CDH3P22223 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH3P22223 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.87□□□□□ -0.19
CDH3P22223 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
CDH3P22223 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.87□□□□□ -0.19
CDH3P22223 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.87□□□□□ -0.19
CDH3P22223 LINC01783-202ENST00000614408 828 ntBASIC13.87□□□□□ -0.19
CDH3P22223 BX284668.2-205ENST00000619677 828 ntBASIC13.87□□□□□ -0.19
CDH3P22223 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 AP001267.2-201ENST00000532619 2086 ntBASIC13.87□□□□□ -0.19
CDH3P22223 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDH3P22223 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH3P22223 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.87□□□□□ -0.19
CDH3P22223 AC011498.7-201ENST00000624986 2027 ntBASIC13.86□□□□□ -0.19
CDH3P22223 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH3P22223 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH3P22223 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 PEG13-201ENST00000631594 5667 ntBASIC13.86□□□□□ -0.19
CDH3P22223 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
CDH3P22223 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH3P22223 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH3P22223 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH3P22223 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.86□□□□□ -0.19
CDH3P22223 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH3P22223 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH3P22223 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH3P22223 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH3P22223 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.86□□□□□ -0.19
CDH3P22223 IGLV3-15-201ENST00000518356 244 ntBASIC13.86□□□□□ -0.19
CDH3P22223 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH3P22223 MIR4754-201ENST00000582477 89 ntBASIC13.86□□□□□ -0.19
CDH3P22223 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.86□□□□□ -0.19
CDH3P22223 AL109837.1-201ENST00000603272 613 ntBASIC13.86□□□□□ -0.19
CDH3P22223 AC090386.2-201ENST00000623010 1039 ntBASIC13.86□□□□□ -0.19
CDH3P22223 AC079336.7-201ENST00000623428 1078 ntBASIC13.86□□□□□ -0.19
CDH3P22223 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH3P22223 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 AP002353.1-201ENST00000528257 1599 ntBASIC13.86□□□□□ -0.19
CDH3P22223 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.86□□□□□ -0.19
CDH3P22223 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 AC064801.2-201ENST00000625052 1303 ntBASIC13.86□□□□□ -0.19
CDH3P22223 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDH3P22223 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDH3P22223 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDH3P22223 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 AC114271.1-201ENST00000612689 2813 ntBASIC13.85□□□□□ -0.19
CDH3P22223 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDH3P22223 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDH3P22223 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms