Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.56□□□□□ -0.4
APOA1P02647 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOA1P02647 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.56□□□□□ -0.4
APOA1P02647 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC12.56□□□□□ -0.4
APOA1P02647 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.56□□□□□ -0.4
APOA1P02647 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOA1P02647 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOA1P02647 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.56□□□□□ -0.4
APOA1P02647 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOA1P02647 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOA1P02647 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
APOA1P02647 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.55□□□□□ -0.4
APOA1P02647 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.55□□□□□ -0.4
APOA1P02647 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.55□□□□□ -0.4
APOA1P02647 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.55□□□□□ -0.4
APOA1P02647 ZNF890P-202ENST00000530367 1156 ntBASIC12.55□□□□□ -0.4
APOA1P02647 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
APOA1P02647 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 MTDHP5-201ENST00000598980 586 ntBASIC12.55□□□□□ -0.4
APOA1P02647 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.55□□□□□ -0.4
APOA1P02647 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 AC126564.1-201ENST00000623628 2013 ntBASIC12.55□□□□□ -0.4
APOA1P02647 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOA1P02647 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOA1P02647 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOA1P02647 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
APOA1P02647 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
APOA1P02647 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.54□□□□□ -0.4
APOA1P02647 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
APOA1P02647 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
APOA1P02647 AC112176.1-201ENST00000565428 3024 ntBASIC12.54□□□□□ -0.4
APOA1P02647 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.54□□□□□ -0.4
APOA1P02647 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.54□□□□□ -0.4
APOA1P02647 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.54□□□□□ -0.4
APOA1P02647 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
APOA1P02647 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 PDIA3P1-201ENST00000471856 1510 ntBASIC12.54□□□□□ -0.4
APOA1P02647 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.54□□□□□ -0.4
APOA1P02647 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.54□□□□□ -0.4
APOA1P02647 MIR1224-201ENST00000408193 85 ntBASIC12.54□□□□□ -0.4
APOA1P02647 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.54□□□□□ -0.4
APOA1P02647 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 AL450487.1-201ENST00000426799 995 ntBASIC12.54□□□□□ -0.4
APOA1P02647 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 AL161932.2-201ENST00000435436 679 ntBASIC12.54□□□□□ -0.4
APOA1P02647 AC114812.1-204ENST00000449669 728 ntBASIC12.54□□□□□ -0.4
APOA1P02647 ALG1L5P-201ENST00000482043 771 ntBASIC12.54□□□□□ -0.4
APOA1P02647 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
APOA1P02647 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.54□□□□□ -0.4
APOA1P02647 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.54□□□□□ -0.4
APOA1P02647 SLC25A1P1-201ENST00000528351 927 ntBASIC12.54□□□□□ -0.4
APOA1P02647 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.54□□□□□ -0.4
APOA1P02647 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.54□□□□□ -0.4
APOA1P02647 AC044860.1-202ENST00000559481 777 ntBASIC12.54□□□□□ -0.4
APOA1P02647 AC027237.1-201ENST00000560942 655 ntBASIC12.54□□□□□ -0.4
APOA1P02647 AC005586.2-201ENST00000563946 837 ntBASIC12.54□□□□□ -0.4
APOA1P02647 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOA1P02647 AL049840.4-201ENST00000602422 811 ntBASIC12.54□□□□□ -0.4
APOA1P02647 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.54□□□□□ -0.4
APOA1P02647 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.54□□□□□ -0.4
APOA1P02647 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.54□□□□□ -0.4
APOA1P02647 SPDYE12P-201ENST00000618416 771 ntBASIC12.54□□□□□ -0.4
APOA1P02647 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms