Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 AC006987.1-201ENST00000413610 527 ntBASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 RPS2P36-201ENST00000456516 831 ntBASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 CHCHD2P9-201ENST00000461726 456 ntBASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 AC068760.1-201ENST00000493579 1953 ntBASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL4A3BPQ9Y5P4 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 AL591122.2-201ENST00000624125 1853 ntBASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 RPL18AP8-201ENST00000486071 528 ntBASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 AC073352.2-201ENST00000609385 439 ntBASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 AC242376.2-201ENST00000619355 883 ntBASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 NCLP1-201ENST00000445357 1963 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 FXNP2-201ENST00000411625 547 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 BX679664.3-201ENST00000414070 555 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 RN7SL181P-201ENST00000462921 277 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AC113935.1-201ENST00000471722 555 ntBASIC15.67■□□□□ 0.1
COL4A3BPQ9Y5P4 AC130709.1-201ENST00000484779 1212 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms