Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC011474.4-201ENST00000623523 2076 ntBASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 AL359881.3-201ENST00000602640 1721 ntBASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 NAA38-204ENST00000575208 529 ntTSL 3 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 AP005212.2-201ENST00000584979 510 ntBASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 MYO15B-237ENST00000642007 4893 ntBASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.89■□□□□ 0.13
SYNPO2Q9UMS6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 KRT8P25-201ENST00000473150 1456 ntBASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.88■□□□□ 0.13
SYNPO2Q9UMS6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms