Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR10V2P-201ENST00000525296 764 ntBASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 CYP2B7P-201ENST00000541697 1476 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC064836.1-201ENST00000405197 704 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 GAPDHP65-201ENST00000425487 1006 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AL606834.1-201ENST00000553836 1169 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 RN7SL827P-201ENST00000607480 288 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 GH2-205ENST00000622506 702 ntTSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC079944.2-201ENST00000478867 734 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 TPI1P2-201ENST00000491343 752 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC108082.1-201ENST00000510857 331 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 DERL1-204ENST00000519018 575 ntTSL 4 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC106774.4-201ENST00000600799 409 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC061965.1-201ENST00000560524 1465 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 AZU1P1-201ENST00000603479 385 ntBASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ALMS1Q8TCU4 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC9□□□□□ -0.97
ALMS1Q8TCU4 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ALMS1Q8TCU4 APRT-202ENST00000426324 664 ntTSL 2 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms