Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.2□□□□□ -0.46
BEST4Q8NFU0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ENPP7P5-201ENST00000541031 1031 ntBASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AP001063.1-201ENST00000568332 529 ntBASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AC026992.2-203ENST00000563004 2419 ntBASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.2□□□□□ -0.46
BEST4Q8NFU0 AC009093.10-201ENST00000641956 1442 ntBASIC12.2□□□□□ -0.46
BEST4Q8NFU0 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 AC134407.3-201ENST00000624035 2139 ntBASIC12.19□□□□□ -0.46
BEST4Q8NFU0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 POM121L8P-201ENST00000417732 1281 ntBASIC12.19□□□□□ -0.46
BEST4Q8NFU0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 AK2P2-201ENST00000439142 405 ntBASIC12.19□□□□□ -0.46
BEST4Q8NFU0 POM121L9P-203ENST00000441984 1285 ntBASIC12.19□□□□□ -0.46
BEST4Q8NFU0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.19□□□□□ -0.46
BEST4Q8NFU0 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms