Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01559Q495D7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01559Q495D7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 USP9YP21-201ENST00000420603 432 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 ZFAND6P1-201ENST00000434138 605 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 CCT6P1-203ENST00000443108 1170 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AF111169.1-201ENST00000469811 374 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 FAM86LP-201ENST00000478302 853 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC069120.2-201ENST00000524091 540 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 MTATP6P15-201ENST00000527233 835 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 UBTFL10-201ENST00000528532 562 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC105233.3-201ENST00000531125 744 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 AP003717.2-201ENST00000534962 898 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01559Q495D7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC015726.1-201ENST00000602353 681 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 ABI1P1-201ENST00000603375 1120 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 AC119674.1-220ENST00000641502 1048 ntBASIC10.96□□□□□ -0.65
LINC01559Q495D7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
LINC01559Q495D7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01559Q495D7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01559Q495D7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC10.95□□□□□ -0.66
LINC01559Q495D7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 BTBD7P1-201ENST00000447253 1453 ntBASIC10.95□□□□□ -0.66
LINC01559Q495D7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 MTND4P34-201ENST00000572715 1371 ntBASIC10.95□□□□□ -0.66
LINC01559Q495D7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01559Q495D7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01559Q495D7 RNU1-38P-201ENST00000362817 144 ntBASIC10.95□□□□□ -0.66
LINC01559Q495D7 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms