Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.69■□□□□ 0.1
ASIC1P78348 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.69■□□□□ 0.1
ASIC1P78348 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.69■□□□□ 0.1
ASIC1P78348 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 AC016700.1-201ENST00000429424 312 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.69■□□□□ 0.1
ASIC1P78348 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.69■□□□□ 0.1
ASIC1P78348 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.69■□□□□ 0.1
ASIC1P78348 AC091804.1-201ENST00000486888 567 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 ALG1L13P-202ENST00000519320 584 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 AC090857.1-201ENST00000527400 390 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ASIC1P78348 KRT8P1-201ENST00000557533 1207 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 RN7SL455P-201ENST00000580629 282 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 MIR4538-201ENST00000581377 78 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
ASIC1P78348 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.69■□□□□ 0.1
ASIC1P78348 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ASIC1P78348 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ASIC1P78348 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ASIC1P78348 AC015909.3-201ENST00000572855 1794 ntBASIC15.69■□□□□ 0.1
ASIC1P78348 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.69■□□□□ 0.1
ASIC1P78348 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.69■□□□□ 0.1
ASIC1P78348 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.69■□□□□ 0.1
ASIC1P78348 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.69■□□□□ 0.1
ASIC1P78348 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ASIC1P78348 FRMPD2B-201ENST00000431305 1347 ntBASIC15.68■□□□□ 0.1
ASIC1P78348 AL359845.1-201ENST00000458202 1648 ntBASIC15.68■□□□□ 0.1
ASIC1P78348 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 AL157791.1-201ENST00000553667 1699 ntBASIC15.68■□□□□ 0.1
ASIC1P78348 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 AC239868.1-201ENST00000369385 493 ntBASIC15.68■□□□□ 0.1
ASIC1P78348 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.68■□□□□ 0.1
ASIC1P78348 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.68■□□□□ 0.1
ASIC1P78348 AC005740.1-201ENST00000515639 522 ntBASIC15.68■□□□□ 0.1
ASIC1P78348 AP001258.2-201ENST00000529891 490 ntBASIC15.68■□□□□ 0.1
ASIC1P78348 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.68■□□□□ 0.1
ASIC1P78348 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ASIC1P78348 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
ASIC1P78348 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ASIC1P78348 AL445209.1-201ENST00000607269 3491 ntBASIC15.67■□□□□ 0.1
ASIC1P78348 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ASIC1P78348 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.67■□□□□ 0.1
ASIC1P78348 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
ASIC1P78348 AC093462.1-201ENST00000621167 1683 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms