Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCC3P46736 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.84□□□□□ -0.03
BRCC3P46736 AL139424.3-202ENST00000641619 917 ntBASIC14.84□□□□□ -0.03
BRCC3P46736 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCC3P46736 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BRCC3P46736 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 AC111170.3-201ENST00000624282 2464 ntBASIC14.84□□□□□ -0.03
BRCC3P46736 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BRCC3P46736 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.84□□□□□ -0.03
BRCC3P46736 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.84□□□□□ -0.03
BRCC3P46736 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BRCC3P46736 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BRCC3P46736 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
BRCC3P46736 AC067750.1-201ENST00000608826 6545 ntBASIC14.83□□□□□ -0.03
BRCC3P46736 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BRCC3P46736 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.83□□□□□ -0.03
BRCC3P46736 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
BRCC3P46736 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRCC3P46736 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRCC3P46736 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRCC3P46736 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
BRCC3P46736 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BRCC3P46736 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BRCC3P46736 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
BRCC3P46736 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BRCC3P46736 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.83□□□□□ -0.04
BRCC3P46736 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.83□□□□□ -0.04
BRCC3P46736 KRT18P66-201ENST00000452970 1269 ntBASIC14.83□□□□□ -0.04
BRCC3P46736 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.83□□□□□ -0.04
BRCC3P46736 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
BRCC3P46736 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCC3P46736 KRT18P37-201ENST00000520711 1282 ntBASIC14.83□□□□□ -0.04
BRCC3P46736 C2orf69P1-201ENST00000563532 1093 ntBASIC14.83□□□□□ -0.04
BRCC3P46736 MIR4326-201ENST00000582203 59 ntBASIC14.83□□□□□ -0.04
BRCC3P46736 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.83□□□□□ -0.04
BRCC3P46736 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.83□□□□□ -0.04
BRCC3P46736 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCC3P46736 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.83□□□□□ -0.04
BRCC3P46736 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.83□□□□□ -0.04
BRCC3P46736 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRCC3P46736 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 AC005089.1-201ENST00000619486 2241 ntBASIC14.82□□□□□ -0.04
BRCC3P46736 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 NRADDP-202ENST00000641269 1585 ntBASIC14.82□□□□□ -0.04
BRCC3P46736 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
BRCC3P46736 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
BRCC3P46736 DKKL1P1-201ENST00000400550 698 ntBASIC14.82□□□□□ -0.04
BRCC3P46736 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.82□□□□□ -0.04
BRCC3P46736 GCSHP3-201ENST00000431120 391 ntBASIC14.82□□□□□ -0.04
BRCC3P46736 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRCC3P46736 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms