Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDM5CP41229 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.83
KDM5CP41229 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
KDM5CP41229 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KDM5CP41229 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KDM5CP41229 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
KDM5CP41229 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KDM5CP41229 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KDM5CP41229 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
KDM5CP41229 AC011239.2-201ENST00000624820 1489 ntBASIC20.27■□□□□ 0.83
KDM5CP41229 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC20.26■□□□□ 0.83
KDM5CP41229 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KDM5CP41229 KRT8P24-201ENST00000560290 1559 ntBASIC20.26■□□□□ 0.83
KDM5CP41229 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM5CP41229 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 AK2P2-201ENST00000439142 405 ntBASIC20.26■□□□□ 0.83
KDM5CP41229 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KDM5CP41229 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC20.26■□□□□ 0.83
KDM5CP41229 FTH1-205ENST00000529631 507 ntTSL 4 BASIC20.26■□□□□ 0.83
KDM5CP41229 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM5CP41229 AP006248.1-201ENST00000610471 67 ntBASIC20.26■□□□□ 0.83
KDM5CP41229 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC20.26■□□□□ 0.83
KDM5CP41229 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KDM5CP41229 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
KDM5CP41229 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC20.26■□□□□ 0.83
KDM5CP41229 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
KDM5CP41229 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM5CP41229 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KDM5CP41229 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KDM5CP41229 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KDM5CP41229 AC026748.1-201ENST00000624349 3251 ntBASIC20.26■□□□□ 0.83
KDM5CP41229 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM5CP41229 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC20.25■□□□□ 0.83
KDM5CP41229 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KDM5CP41229 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KDM5CP41229 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 RN7SL638P-201ENST00000494527 290 ntBASIC20.25■□□□□ 0.83
KDM5CP41229 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC20.25■□□□□ 0.83
KDM5CP41229 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 AC127002.1-201ENST00000619123 455 ntBASIC20.25■□□□□ 0.83
KDM5CP41229 AC099795.2-201ENST00000639582 440 ntBASIC20.25■□□□□ 0.83
KDM5CP41229 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 AC106785.2-201ENST00000564385 1319 ntBASIC20.25■□□□□ 0.83
KDM5CP41229 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KDM5CP41229 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM5CP41229 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
KDM5CP41229 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM5CP41229 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM5CP41229 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 AC067942.1-202ENST00000471756 1057 ntBASIC20.25■□□□□ 0.83
KDM5CP41229 AC099343.1-201ENST00000513481 609 ntBASIC20.25■□□□□ 0.83
KDM5CP41229 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC20.25■□□□□ 0.83
KDM5CP41229 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC20.25■□□□□ 0.83
KDM5CP41229 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC20.25■□□□□ 0.83
KDM5CP41229 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM5CP41229 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
KDM5CP41229 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 DDC-212ENST00000615193 1674 ntTSL 3 BASIC20.24■□□□□ 0.83
KDM5CP41229 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KDM5CP41229 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM5CP41229 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KDM5CP41229 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM5CP41229 SNORA30.1-201ENST00000363193 129 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms