Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 RN7SL357P-201ENST00000581065 298 ntBASIC15.47■□□□□ 0.07
RFC5P40937 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
RFC5P40937 AP001542.1-201ENST00000591314 200 ntBASIC15.47■□□□□ 0.07
RFC5P40937 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RFC5P40937 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 AC093462.1-201ENST00000621167 1683 ntBASIC15.47■□□□□ 0.07
RFC5P40937 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
RFC5P40937 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.47■□□□□ 0.07
RFC5P40937 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.47■□□□□ 0.07
RFC5P40937 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 AL928654.5-201ENST00000624831 2501 ntBASIC15.47■□□□□ 0.07
RFC5P40937 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.47■□□□□ 0.07
RFC5P40937 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.47■□□□□ 0.07
RFC5P40937 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 COL6A4P2-202ENST00000504443 2753 ntBASIC15.47■□□□□ 0.07
RFC5P40937 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.47■□□□□ 0.07
RFC5P40937 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC5P40937 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC5P40937 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RFC5P40937 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC5P40937 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RFC5P40937 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RFC5P40937 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC5P40937 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC5P40937 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.46■□□□□ 0.07
RFC5P40937 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RFC5P40937 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.46■□□□□ 0.07
RFC5P40937 AP003398.1-201ENST00000531124 318 ntBASIC15.46■□□□□ 0.07
RFC5P40937 CR383656.3-201ENST00000551315 183 ntBASIC15.46■□□□□ 0.07
RFC5P40937 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.46■□□□□ 0.07
RFC5P40937 AC012073.1-201ENST00000606114 1108 ntBASIC15.46■□□□□ 0.07
RFC5P40937 AL009176.1-201ENST00000607876 650 ntBASIC15.46■□□□□ 0.07
RFC5P40937 RN7SL736P-201ENST00000613111 269 ntBASIC15.46■□□□□ 0.07
RFC5P40937 MIR6858-201ENST00000620733 67 ntBASIC15.46■□□□□ 0.07
RFC5P40937 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.46■□□□□ 0.07
RFC5P40937 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC5P40937 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC5P40937 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC5P40937 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFC5P40937 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFC5P40937 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.46■□□□□ 0.06
RFC5P40937 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFC5P40937 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC5P40937 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFC5P40937 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
RFC5P40937 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC5P40937 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RFC5P40937 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RFC5P40937 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC5P40937 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC5P40937 MIR1307-201ENST00000408840 149 ntBASIC15.45■□□□□ 0.06
RFC5P40937 OR52M2P-201ENST00000414298 959 ntBASIC15.45■□□□□ 0.06
RFC5P40937 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.45■□□□□ 0.06
RFC5P40937 AC005722.1-201ENST00000431878 964 ntBASIC15.45■□□□□ 0.06
RFC5P40937 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.45■□□□□ 0.06
RFC5P40937 EEF1DP2-201ENST00000433698 843 ntBASIC15.45■□□□□ 0.06
RFC5P40937 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.45■□□□□ 0.06
RFC5P40937 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.45■□□□□ 0.06
RFC5P40937 AC018463.1-201ENST00000456674 917 ntBASIC15.45■□□□□ 0.06
RFC5P40937 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms