Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6BP35913 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.05■□□□□ 0.32
PDE6BP35913 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6BP35913 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC17.05■□□□□ 0.32
PDE6BP35913 AC092910.2-201ENST00000491262 348 ntBASIC17.05■□□□□ 0.32
PDE6BP35913 AC093700.1-201ENST00000503348 717 ntBASIC17.05■□□□□ 0.32
PDE6BP35913 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 OR4A49P-201ENST00000527050 632 ntBASIC17.05■□□□□ 0.32
PDE6BP35913 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC17.05■□□□□ 0.32
PDE6BP35913 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.05■□□□□ 0.32
PDE6BP35913 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6BP35913 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
PDE6BP35913 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDE6BP35913 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 AC126177.1-201ENST00000547829 2218 ntBASIC17.04■□□□□ 0.32
PDE6BP35913 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6BP35913 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 HLA-W-207ENST00000439514 771 ntBASIC17.04■□□□□ 0.32
PDE6BP35913 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 PSME2P2-201ENST00000453033 700 ntBASIC17.04■□□□□ 0.32
PDE6BP35913 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC17.04■□□□□ 0.32
PDE6BP35913 ISL1-203ENST00000511384 981 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 LY6E-215ENST00000523847 427 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6BP35913 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6BP35913 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6BP35913 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC17.04■□□□□ 0.32
PDE6BP35913 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC17.04■□□□□ 0.32
PDE6BP35913 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC17.04■□□□□ 0.32
PDE6BP35913 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDE6BP35913 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDE6BP35913 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 KRT8P42-201ENST00000405771 1399 ntBASIC17.03■□□□□ 0.32
PDE6BP35913 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 AL050341.2-201ENST00000567508 1541 ntBASIC17.03■□□□□ 0.32
PDE6BP35913 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PDE6BP35913 ASS1P1-201ENST00000402854 1237 ntBASIC17.03■□□□□ 0.32
PDE6BP35913 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.03■□□□□ 0.32
PDE6BP35913 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.03■□□□□ 0.32
PDE6BP35913 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC17.03■□□□□ 0.32
PDE6BP35913 NDUFB2P1-201ENST00000506966 295 ntBASIC17.03■□□□□ 0.32
PDE6BP35913 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.03■□□□□ 0.32
PDE6BP35913 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PDE6BP35913 MIR5091-201ENST00000578707 93 ntBASIC17.03■□□□□ 0.32
PDE6BP35913 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.03■□□□□ 0.32
PDE6BP35913 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6BP35913 BX322562.1-201ENST00000617004 561 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms