Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
VCLP18206 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VCLP18206 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 KRT18P36-201ENST00000411618 1276 ntBASIC14.22□□□□□ -0.13
VCLP18206 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.22□□□□□ -0.13
VCLP18206 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.22□□□□□ -0.13
VCLP18206 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.22□□□□□ -0.13
VCLP18206 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.22□□□□□ -0.13
VCLP18206 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 AC092299.1-201ENST00000632679 757 ntBASIC14.22□□□□□ -0.13
VCLP18206 KRT8P21-201ENST00000430398 1491 ntBASIC14.22□□□□□ -0.13
VCLP18206 LAP3P2-201ENST00000454686 1454 ntBASIC14.22□□□□□ -0.13
VCLP18206 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 AC090643.2-201ENST00000623442 2029 ntBASIC14.22□□□□□ -0.13
VCLP18206 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.22□□□□□ -0.13
VCLP18206 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.22□□□□□ -0.13
VCLP18206 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VCLP18206 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
VCLP18206 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VCLP18206 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.21□□□□□ -0.13
VCLP18206 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.21□□□□□ -0.13
VCLP18206 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VCLP18206 AC006335.1-201ENST00000445200 547 ntBASIC14.21□□□□□ -0.13
VCLP18206 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 ACTG1P17-201ENST00000558391 1119 ntBASIC14.21□□□□□ -0.13
VCLP18206 MIR3188-201ENST00000583494 85 ntBASIC14.21□□□□□ -0.13
VCLP18206 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 AL157813.1-201ENST00000612996 587 ntBASIC14.21□□□□□ -0.13
VCLP18206 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VCLP18206 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VCLP18206 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VCLP18206 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VCLP18206 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VCLP18206 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.21□□□□□ -0.14
VCLP18206 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
VCLP18206 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
VCLP18206 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VCLP18206 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VCLP18206 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VCLP18206 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VCLP18206 AC004899.2-201ENST00000622993 3860 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms