Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL450346.2-201ENST00000495602 1024 ntBASIC23.56■■□□□ 1.36
TOP2AP11388 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC23.56■■□□□ 1.36
TOP2AP11388 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC23.56■■□□□ 1.36
TOP2AP11388 METTL23-211ENST00000589977 617 ntTSL 3 BASIC23.56■■□□□ 1.36
TOP2AP11388 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 AL512324.3-201ENST00000619383 882 ntBASIC23.56■■□□□ 1.36
TOP2AP11388 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC23.56■■□□□ 1.36
TOP2AP11388 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TOP2AP11388 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TOP2AP11388 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC23.55■■□□□ 1.36
TOP2AP11388 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC23.55■■□□□ 1.36
TOP2AP11388 RN7SL33P-201ENST00000462543 342 ntBASIC23.55■■□□□ 1.36
TOP2AP11388 RN7SL638P-201ENST00000494527 290 ntBASIC23.55■■□□□ 1.36
TOP2AP11388 FTH1-205ENST00000529631 507 ntTSL 4 BASIC23.55■■□□□ 1.36
TOP2AP11388 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC23.55■■□□□ 1.36
TOP2AP11388 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC23.55■■□□□ 1.36
TOP2AP11388 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC23.55■■□□□ 1.36
TOP2AP11388 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TOP2AP11388 RN7SL202P-201ENST00000584410 262 ntBASIC23.55■■□□□ 1.36
TOP2AP11388 AC009118.3-201ENST00000622896 873 ntBASIC23.55■■□□□ 1.36
TOP2AP11388 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 Z82244.2-201ENST00000632196 448 ntBASIC23.55■■□□□ 1.36
TOP2AP11388 CDIPT-AS1-203ENST00000638164 713 ntBASIC23.55■■□□□ 1.36
TOP2AP11388 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 CD9-212ENST00000610354 1315 ntTSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC23.55■■□□□ 1.36
TOP2AP11388 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
TOP2AP11388 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TOP2AP11388 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
TOP2AP11388 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC23.54■■□□□ 1.36
TOP2AP11388 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC23.54■■□□□ 1.36
TOP2AP11388 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC23.54■■□□□ 1.36
TOP2AP11388 AC008021.1-201ENST00000474180 414 ntBASIC23.54■■□□□ 1.36
TOP2AP11388 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC23.54■■□□□ 1.36
TOP2AP11388 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 RN7SL300P-201ENST00000582522 318 ntBASIC23.54■■□□□ 1.36
TOP2AP11388 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC23.54■■□□□ 1.36
TOP2AP11388 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TOP2AP11388 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC23.54■■□□□ 1.36
TOP2AP11388 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
TOP2AP11388 KLK8-203ENST00000347619 555 ntTSL 2 BASIC23.54■■□□□ 1.36
TOP2AP11388 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TOP2AP11388 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC23.54■■□□□ 1.36
TOP2AP11388 AC010395.2-201ENST00000509899 904 ntBASIC23.54■■□□□ 1.36
TOP2AP11388 DERL1-204ENST00000519018 575 ntTSL 4 BASIC23.54■■□□□ 1.36
TOP2AP11388 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
TOP2AP11388 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 MIR6125-201ENST00000618986 96 ntBASIC23.54■■□□□ 1.36
TOP2AP11388 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TOP2AP11388 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC23.53■■□□□ 1.36
TOP2AP11388 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TOP2AP11388 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC23.53■■□□□ 1.36
TOP2AP11388 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TOP2AP11388 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC23.53■■□□□ 1.36
TOP2AP11388 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms