Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM88BA6NKF7 AL139424.2-202ENST00000641335 1369 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AL022313.4-201ENST00000562756 2046 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC024475.2-201ENST00000312173 879 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC012100.1-201ENST00000470304 282 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 DIS3L2P1-201ENST00000509197 559 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AL133551.1-201ENST00000610279 1222 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC007274.3-201ENST00000619838 385 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 AC138035.3-201ENST00000622706 2791 ntBASIC15.87■□□□□ 0.13
TMEM88BA6NKF7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AC011498.7-201ENST00000624986 2027 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AC004884.1-201ENST00000393647 319 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 GAPDHP65-201ENST00000425487 1006 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 HNRNPA1P68-201ENST00000425806 979 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 GAPDHP29-201ENST00000429913 985 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AP000343.1-201ENST00000440602 385 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 DDX11L8-201ENST00000535849 366 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AC104759.1-201ENST00000559109 939 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AC090950.1-202ENST00000605733 644 ntBASIC15.86■□□□□ 0.13
TMEM88BA6NKF7 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms