Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AC010141.1-201ENST00000411585 623 ntBASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 SNX29P1-201ENST00000548357 1007 ntBASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 SHC1P1-201ENST00000425230 1745 ntBASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 CICP12-201ENST00000455801 843 ntBASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 HILS1-202ENST00000545329 423 ntBASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 MIR6775-201ENST00000617557 69 ntBASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC027601.3-201ENST00000622907 509 ntBASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC004623.1-201ENST00000624592 2127 ntBASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTN4IP1Q8WWV3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms