Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 VDAC1P1-201ENST00000439229 848 ntBASIC13.14□□□□□ -0.31
REEP3Q6NUK4 CSF2RBP1-201ENST00000447905 391 ntBASIC13.14□□□□□ -0.31
REEP3Q6NUK4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AC005225.4-201ENST00000557330 545 ntBASIC13.14□□□□□ -0.31
REEP3Q6NUK4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AL023803.2-201ENST00000620080 638 ntBASIC13.14□□□□□ -0.31
REEP3Q6NUK4 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 KRT8P29-201ENST00000420409 1371 ntBASIC13.14□□□□□ -0.31
REEP3Q6NUK4 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
REEP3Q6NUK4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 AC083964.2-201ENST00000623988 2396 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 DLX4-206ENST00000611342 1662 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 AC011742.3-201ENST00000439053 820 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 HSPB1P2-201ENST00000448722 546 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 HLA-J-204ENST00000495278 958 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 CHCHD2P2-201ENST00000503744 321 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 LINC02084-201ENST00000606069 1096 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 LINC00638-201ENST00000555578 2518 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 STRCP1-201ENST00000509801 5328 ntBASIC13.13□□□□□ -0.31
REEP3Q6NUK4 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.13□□□□□ -0.31
REEP3Q6NUK4 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
REEP3Q6NUK4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms