Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 AL008707.1-201ENST00000422498 534 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 NDUFB10P1-201ENST00000567319 521 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 MIR6869-201ENST00000619434 62 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 AC015967.2-201ENST00000624092 234 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 AC006435.4-201ENST00000625037 234 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 AL356737.1-201ENST00000634391 234 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 AL031595.1-201ENST00000623969 4709 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 FRMPD2B-201ENST00000431305 1347 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 MARK2P16-201ENST00000605714 1723 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 TCAF1P1-201ENST00000414990 2232 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 AC136604.1-202ENST00000425471 771 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 AL596276.2-201ENST00000447525 331 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HIST1H3AP68431 SLC25A15P3-201ENST00000505530 290 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 ZNF767P-206ENST00000513792 565 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 AP001258.2-201ENST00000529891 490 ntBASIC12.28□□□□□ -0.44
HIST1H3AP68431 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.28□□□□□ -0.44
HIST1H3AP68431 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms