Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.63□□□□□ -0.39
VBP1P61758 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.63□□□□□ -0.39
VBP1P61758 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.63□□□□□ -0.39
VBP1P61758 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.63□□□□□ -0.39
VBP1P61758 SPDYE12P-201ENST00000618416 771 ntBASIC12.63□□□□□ -0.39
VBP1P61758 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
VBP1P61758 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VBP1P61758 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.63□□□□□ -0.39
VBP1P61758 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VBP1P61758 FLJ30679-201ENST00000624773 1980 ntBASIC12.63□□□□□ -0.39
VBP1P61758 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.63□□□□□ -0.39
VBP1P61758 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VBP1P61758 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VBP1P61758 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.62□□□□□ -0.39
VBP1P61758 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.62□□□□□ -0.39
VBP1P61758 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 AC090114.2-201ENST00000608477 7054 ntBASIC12.62□□□□□ -0.39
VBP1P61758 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VBP1P61758 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 SPDYE7P-202ENST00000420373 878 ntBASIC12.62□□□□□ -0.39
VBP1P61758 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 HTR5BP-201ENST00000430851 1154 ntBASIC12.62□□□□□ -0.39
VBP1P61758 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
VBP1P61758 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.62□□□□□ -0.39
VBP1P61758 AP001582.1-201ENST00000525856 295 ntBASIC12.62□□□□□ -0.39
VBP1P61758 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.62□□□□□ -0.39
VBP1P61758 AL138828.2-201ENST00000615812 383 ntBASIC12.62□□□□□ -0.39
VBP1P61758 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.62□□□□□ -0.39
VBP1P61758 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VBP1P61758 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.62□□□□□ -0.39
VBP1P61758 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VBP1P61758 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.62□□□□□ -0.39
VBP1P61758 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 DBIL5P-203ENST00000536214 2677 ntBASIC12.61□□□□□ -0.39
VBP1P61758 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.61□□□□□ -0.39
VBP1P61758 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VBP1P61758 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.61□□□□□ -0.39
VBP1P61758 MKNK2P1-201ENST00000437526 628 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms