Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APOBEC1P41238 ABCD1P2-201ENST00000429313 1601 ntBASIC12.71□□□□□ -0.37
APOBEC1P41238 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.71□□□□□ -0.37
APOBEC1P41238 PCDHA5-203ENST00000614258 4248 ntBASIC12.71□□□□□ -0.37
APOBEC1P41238 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
APOBEC1P41238 MIR645-201ENST00000385283 94 ntBASIC12.71□□□□□ -0.37
APOBEC1P41238 SNORA50C-201ENST00000408535 133 ntBASIC12.71□□□□□ -0.37
APOBEC1P41238 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.71□□□□□ -0.37
APOBEC1P41238 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.71□□□□□ -0.37
APOBEC1P41238 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.71□□□□□ -0.37
APOBEC1P41238 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.71□□□□□ -0.37
APOBEC1P41238 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.71□□□□□ -0.37
APOBEC1P41238 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.71□□□□□ -0.37
APOBEC1P41238 AL353770.1-201ENST00000614915 403 ntBASIC12.71□□□□□ -0.37
APOBEC1P41238 CU633904.3-201ENST00000624042 1029 ntBASIC12.71□□□□□ -0.37
APOBEC1P41238 SNORA50.1-201ENST00000628590 135 ntBASIC12.71□□□□□ -0.37
APOBEC1P41238 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOBEC1P41238 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.71□□□□□ -0.37
APOBEC1P41238 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.71□□□□□ -0.37
APOBEC1P41238 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.71□□□□□ -0.38
APOBEC1P41238 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
APOBEC1P41238 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
APOBEC1P41238 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
APOBEC1P41238 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 KRT8P43-201ENST00000406052 1458 ntBASIC12.71□□□□□ -0.38
APOBEC1P41238 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.71□□□□□ -0.38
APOBEC1P41238 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.71□□□□□ -0.38
APOBEC1P41238 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.71□□□□□ -0.38
APOBEC1P41238 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
APOBEC1P41238 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.71□□□□□ -0.38
APOBEC1P41238 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOBEC1P41238 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.7□□□□□ -0.38
APOBEC1P41238 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
APOBEC1P41238 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 AC093462.1-201ENST00000621167 1683 ntBASIC12.7□□□□□ -0.38
APOBEC1P41238 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOBEC1P41238 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
APOBEC1P41238 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOBEC1P41238 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.7□□□□□ -0.38
APOBEC1P41238 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.7□□□□□ -0.38
APOBEC1P41238 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.7□□□□□ -0.38
APOBEC1P41238 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
APOBEC1P41238 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.7□□□□□ -0.38
APOBEC1P41238 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.7□□□□□ -0.38
APOBEC1P41238 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 AC242376.1-201ENST00000559033 726 ntBASIC12.7□□□□□ -0.38
APOBEC1P41238 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.7□□□□□ -0.38
APOBEC1P41238 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
APOBEC1P41238 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.7□□□□□ -0.38
APOBEC1P41238 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBEC1P41238 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
APOBEC1P41238 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms