Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.98□□□□□ -0.17
VARSP26640 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.98□□□□□ -0.17
VARSP26640 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VARSP26640 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.97□□□□□ -0.17
VARSP26640 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.97□□□□□ -0.17
VARSP26640 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.97□□□□□ -0.17
VARSP26640 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 LINC02486-201ENST00000604157 3000 ntBASIC13.97□□□□□ -0.17
VARSP26640 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VARSP26640 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.97□□□□□ -0.17
VARSP26640 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VARSP26640 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VARSP26640 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.97□□□□□ -0.17
VARSP26640 PSAT1P2-201ENST00000426107 972 ntBASIC13.97□□□□□ -0.17
VARSP26640 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.97□□□□□ -0.17
VARSP26640 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC13.97□□□□□ -0.17
VARSP26640 EIF4HP1-201ENST00000453115 687 ntBASIC13.97□□□□□ -0.17
VARSP26640 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.97□□□□□ -0.17
VARSP26640 RNMTL1P1-201ENST00000454103 560 ntBASIC13.97□□□□□ -0.17
VARSP26640 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.97□□□□□ -0.17
VARSP26640 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.97□□□□□ -0.17
VARSP26640 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VARSP26640 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.97□□□□□ -0.17
VARSP26640 AL160314.3-201ENST00000556041 767 ntBASIC13.97□□□□□ -0.17
VARSP26640 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC13.97□□□□□ -0.17
VARSP26640 AC016629.1-201ENST00000596579 586 ntBASIC13.97□□□□□ -0.17
VARSP26640 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.97□□□□□ -0.17
VARSP26640 AC009884.2-201ENST00000603110 324 ntBASIC13.97□□□□□ -0.17
VARSP26640 MIR6727-201ENST00000620702 65 ntBASIC13.97□□□□□ -0.17
VARSP26640 AC009118.3-201ENST00000622896 873 ntBASIC13.97□□□□□ -0.17
VARSP26640 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
VARSP26640 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
VARSP26640 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.97□□□□□ -0.17
VARSP26640 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
VARSP26640 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 AC144522.1-201ENST00000625111 1658 ntBASIC13.97□□□□□ -0.17
VARSP26640 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VARSP26640 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VARSP26640 CYP4F23P-201ENST00000593402 1579 ntBASIC13.96□□□□□ -0.17
VARSP26640 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.96□□□□□ -0.17
VARSP26640 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.96□□□□□ -0.17
VARSP26640 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 POM121L4P-202ENST00000427789 1891 ntBASIC13.96□□□□□ -0.17
VARSP26640 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.96□□□□□ -0.17
VARSP26640 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.96□□□□□ -0.17
VARSP26640 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 AC012441.2-201ENST00000444843 739 ntBASIC13.96□□□□□ -0.17
VARSP26640 MPRIPP1-201ENST00000452433 1089 ntBASIC13.96□□□□□ -0.17
VARSP26640 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.96□□□□□ -0.17
VARSP26640 AC021723.1-201ENST00000486306 515 ntBASIC13.96□□□□□ -0.17
VARSP26640 AC006122.1-201ENST00000493323 440 ntBASIC13.96□□□□□ -0.17
VARSP26640 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 KATNBL1P4-201ENST00000503545 918 ntBASIC13.96□□□□□ -0.17
VARSP26640 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.96□□□□□ -0.17
VARSP26640 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms