Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 AC115284.2-201ENST00000624646 2054 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NR4A1P22736 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.18□□□□□ -0.3
NR4A1P22736 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NR4A1P22736 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NR4A1P22736 AC092933.1-201ENST00000393644 945 ntBASIC13.18□□□□□ -0.3
NR4A1P22736 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.18□□□□□ -0.3
NR4A1P22736 ACTBP8-201ENST00000403258 1108 ntBASIC13.18□□□□□ -0.3
NR4A1P22736 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
NR4A1P22736 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.18□□□□□ -0.3
NR4A1P22736 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.18□□□□□ -0.3
NR4A1P22736 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.18□□□□□ -0.3
NR4A1P22736 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A1P22736 AL512343.1-201ENST00000605837 169 ntBASIC13.18□□□□□ -0.3
NR4A1P22736 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A1P22736 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A1P22736 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 AL136172.1-201ENST00000598590 1394 ntBASIC13.18□□□□□ -0.3
NR4A1P22736 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.18□□□□□ -0.3
NR4A1P22736 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NR4A1P22736 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NR4A1P22736 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NR4A1P22736 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NR4A1P22736 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.17□□□□□ -0.3
NR4A1P22736 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.17□□□□□ -0.3
NR4A1P22736 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A1P22736 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NR4A1P22736 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NR4A1P22736 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.17□□□□□ -0.3
NR4A1P22736 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A1P22736 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.17□□□□□ -0.3
NR4A1P22736 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.17□□□□□ -0.3
NR4A1P22736 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NR4A1P22736 ARSEP1-201ENST00000420443 635 ntBASIC13.17□□□□□ -0.3
NR4A1P22736 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.17□□□□□ -0.3
NR4A1P22736 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms