Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.18□□□□□ -0.14
RETP07949 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.18□□□□□ -0.14
RETP07949 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
RETP07949 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RETP07949 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RETP07949 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.18□□□□□ -0.14
RETP07949 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.18□□□□□ -0.14
RETP07949 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RETP07949 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RETP07949 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
RETP07949 AL590440.2-201ENST00000641973 1595 ntBASIC14.17□□□□□ -0.14
RETP07949 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.17□□□□□ -0.14
RETP07949 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.17□□□□□ -0.14
RETP07949 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.17□□□□□ -0.14
RETP07949 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.17□□□□□ -0.14
RETP07949 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.17□□□□□ -0.14
RETP07949 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RETP07949 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.17□□□□□ -0.14
RETP07949 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.17□□□□□ -0.14
RETP07949 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.17□□□□□ -0.14
RETP07949 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.17□□□□□ -0.14
RETP07949 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.17□□□□□ -0.14
RETP07949 AC233280.19-201ENST00000633223 136 ntBASIC14.17□□□□□ -0.14
RETP07949 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.17□□□□□ -0.14
RETP07949 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RETP07949 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RETP07949 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RETP07949 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
RETP07949 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.17□□□□□ -0.14
RETP07949 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.17□□□□□ -0.14
RETP07949 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RETP07949 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RETP07949 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RETP07949 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RETP07949 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.16□□□□□ -0.14
RETP07949 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
RETP07949 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RETP07949 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
RETP07949 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.16□□□□□ -0.14
RETP07949 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.16□□□□□ -0.14
RETP07949 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.16□□□□□ -0.14
RETP07949 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.16□□□□□ -0.14
RETP07949 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.16□□□□□ -0.14
RETP07949 RN7SL564P-201ENST00000496309 250 ntBASIC14.16□□□□□ -0.14
RETP07949 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.16□□□□□ -0.14
RETP07949 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.16□□□□□ -0.14
RETP07949 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.16□□□□□ -0.14
RETP07949 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.16□□□□□ -0.14
RETP07949 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.16□□□□□ -0.14
RETP07949 RN7SL121P-201ENST00000584223 273 ntBASIC14.16□□□□□ -0.14
RETP07949 AL133467.4-201ENST00000602953 725 ntBASIC14.16□□□□□ -0.14
RETP07949 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.16□□□□□ -0.14
RETP07949 AP000769.1-203ENST00000637245 208 ntBASIC14.16□□□□□ -0.14
RETP07949 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RETP07949 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms