Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 AC242376.1-201ENST00000559033 726 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.94□□□□□ -0.34
NKX2-2O95096 RN7SL665P-201ENST00000578793 300 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NKX2-2O95096 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX2-2O95096 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX2-2O95096 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NKX2-2O95096 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NKX2-2O95096 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NKX2-2O95096 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 ZNF493-208ENST00000599461 1769 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 NRADDP-202ENST00000641269 1585 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 FAM90A2P-201ENST00000511144 1395 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 FAM90A25P-201ENST00000528404 1395 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 AC020658.7-201ENST00000624274 2442 ntBASIC12.93□□□□□ -0.34
NKX2-2O95096 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 MIR557-201ENST00000385239 98 ntBASIC12.93□□□□□ -0.34
NKX2-2O95096 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NKX2-2O95096 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-2O95096 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-2O95096 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-2O95096 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-2O95096 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AC132825.4-202ENST00000578792 434 ntBASIC12.93□□□□□ -0.34
NKX2-2O95096 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AL353770.1-201ENST00000614915 403 ntBASIC12.93□□□□□ -0.34
NKX2-2O95096 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NKX2-2O95096 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 AC138761.6-201ENST00000583997 1423 ntBASIC12.93□□□□□ -0.34
NKX2-2O95096 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-2O95096 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NKX2-2O95096 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-2O95096 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-2O95096 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-2O95096 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-2O95096 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX2-2O95096 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-2O95096 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-2O95096 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-2O95096 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms